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  5. Aop_g56283

Aop_g56283 (ATH5, ATTRX5, TRX5, LIV1)


Aliases : ATH5, ATTRX5, TRX5, LIV1

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g56283
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT5G39950 TRXH2, TRX2,... thioredoxin 2 0.02 OrthoFinder output from all 47 species
AT5G42980 ATTRX3, ATTRXH3,... thioredoxin 3 0.03 OrthoFinder output from all 47 species
Adi_g028432 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g070496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23022 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30073 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34712 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25376 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g39941 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g54864 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g63098 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g44237 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31772 TY1, TRX-Y1, ATY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032600001 TRXH2, TRX2,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58630.1 TRXH2, TRX2,... H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Len_g53329 ATF1, TRXF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26346 ATCXXS1, CXXS1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29484 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g04870.1 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Spa_g38146 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36286 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 43 139
No external refs found!