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  5. Aop_g58325

Aop_g58325 (RRTF1)


Aliases : RRTF1

Description : subgroup ERF-X transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00099690 RAP2.6,... Ethylene-responsive transcription factor ERF110... 0.02 OrthoFinder output from all 47 species
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 OrthoFinder output from all 47 species
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.02 OrthoFinder output from all 47 species
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g116599 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g20736 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g11691 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Gb_07474 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_34848 ERF-1, ATERF-1 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g48350.1 DREB1A, ATCBF3,... Dehydration-responsive element-binding protein 1E... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os05g34730.1 LOC_Os05g34730 transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.03 OrthoFinder output from all 47 species
Len_g31258 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
MA_426919g0030 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_45733g0020 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
MA_88g0020 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp7g09350.1 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Ore_g07820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27584 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g32583 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g23466 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
Pnu_g05946 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pp3c10_17870V3.1 Pp3c10_17870 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c16_13260V3.1 Pp3c16_13260 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c1_5010V3.1 Pp3c1_5010 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Smo68470 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc01g067540.2.1 PUCHI, Solyc01g067540 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc04g078640.3.1 DEAR2, Solyc04g078640 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc12g009240.1.1 Solyc12g009240 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g038450.1.1 ATERF8, ATERF-8,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g08163 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e032434_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.01 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 155 204
No external refs found!