Aop_g58664


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58664

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g015162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02920 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene30712.t1 Aspi01Gene30712 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g04356 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.1 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g28816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.08 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.08 OrthoFinder output from all 47 species
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g08899 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g18697 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 218 253
IPR001646 5peptide_repeat 176 212
No external refs found!