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  5. Aop_g60132

Aop_g60132


Description : not classified & original description: none


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g60132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Aob_g29676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g31795 RPP13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.07 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
GSVIVT01026747001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
Gb_25817 No alias Putative disease resistance protein At1g58400... 0.02 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_35026 ZAR1 Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.02 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.06 OrthoFinder output from all 47 species
Pir_g31525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.01 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g039410.3.1 Solyc07g039410 Putative disease resistance RPP13-like protein 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 5 167
No external refs found!