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  5. Aop_g62066

Aop_g62066


Description : not classified & original description: none


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g62066

Target Alias Description ECC score Gene Family Method Actions
Adi_g103931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g18833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26171 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g29001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004710_P005 Zm00001e004710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 453 565
IPR000504 RRM_dom 269 327
IPR000504 RRM_dom 362 433
No external refs found!