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  5. Aop_g62161

Aop_g62161 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g62161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00227100 GLR2.2,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
Aev_g13740 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14271 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33532 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene41861.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G024600.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G068100.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G032300.1 GLR3.3,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g07200 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17475 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g00747 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
MA_103602g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_37580g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Nbi_g09999 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc06g063170.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Spa_g02201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47108 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 490 810
IPR001828 ANF_lig-bd_rcpt 49 404
IPR001320 Iontro_rcpt_C 592 757
No external refs found!