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  5. Lfl_g15294

Lfl_g15294


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15294

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00257890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT3G45150 TCP16 TCP domain protein 16 0.02 OrthoFinder output from all 47 species
AT5G23280 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g060147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042743 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-1476 0.04 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
Gb_34229 AtTCP14, TCP14 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.02 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g07480.1 LOC_Os12g07480 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_16752g0010 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_16752g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Ore_g04818 No alias circadian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Pir_g27243 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13050 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g103780.4.1 Solyc01g103780 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc08g080150.1.1 Solyc08g080150 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Spa_g50970 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14928 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 142 250
No external refs found!