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  5. Aop_g69297

Aop_g69297


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g69297

Target Alias Description ECC score Gene Family Method Actions
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0470.g072895 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Azfi_s0934.g093088 No alias not classified & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Dcu_g36076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
Lfl_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017838 No alias component *(CAL) of NADH dehydrogenase carbonic... 0.03 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Tin_g19996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29126 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 457 504
IPR002885 Pentatricopeptide_repeat 756 802
IPR002885 Pentatricopeptide_repeat 555 603
IPR002885 Pentatricopeptide_repeat 357 400
IPR002885 Pentatricopeptide_repeat 653 699
IPR002885 Pentatricopeptide_repeat 258 286
IPR002885 Pentatricopeptide_repeat 730 751
IPR002885 Pentatricopeptide_repeat 432 454
IPR002885 Pentatricopeptide_repeat 828 849
IPR046849 Eplus_motif 937 960
IPR032867 DYW_dom 968 1059
No external refs found!