Aliases : ATHDA14, hda14
Description : class-II histone deacetylase & original description: none
Gene families : OG0006068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g00560 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00054p00095350 | ATHDA14, hda14,... | Chromatin organisation.histone modifications.histone... | 0.1 | OrthoFinder output from all 47 species | |
| AT4G33470 | ATHDA14, hda14 | histone deacetylase 14 | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g102599 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03857 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g36918 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g53688 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g17399 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene67945.t1 | ATHDA14, hda14,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene67947.t1 | ATHDA14, hda14,... | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04565 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38945 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01026467001 | ATHDA14, hda14 | Chromatin organisation.histone modifications.histone... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g08220.1 | ATHDA14, hda14,... | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05964 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| MA_10435687g0010 | ATHDA14, hda14 | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g01300.1 | ATHDA14, hda14 | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g18920 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g35902 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19601 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g06418 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g009120.3.1 | ATHDA14, hda14,... | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09807 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g11637 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 94 | 397 |
| No external refs found! |
