Aliases : RBCL
Description : large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none
Gene families : OG0002607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272640 | evm_27.TU.AmTr_v1... | Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00184400 | RBCL,... | Ribulose bisphosphate carboxylase large chain... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00606p00006850 | RBCL,... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| ATCG00490 | RBCL | ribulose-bisphosphate carboxylases | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01070 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11735 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06423 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g03296 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16071 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01013856001 | RBCL | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022403001 | RBCL | Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban | 0.02 | OrthoFinder output from all 47 species | |
| Gb_07644 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_15502 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_34523 | No alias | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_37464 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g58020.1 | RBCL, LOC_Os01g58020 | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g21268.1 | RBCL, LOC_Os10g21268 | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g10580.1 | RBCL, LOC_Os12g10580 | component psRPS15 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Len_g01809 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g07296 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g16802 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g01544 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08990 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002257 | RBCL | not classified & original description: CDS=1-450 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0313.g027218 | RBCL | not classified & original description: CDS=1-270 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g02085 | No alias | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Smo137874 | RBCL | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc00g500063.1.1 | RBCL, Solyc00g500063 | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g021200.1.1 | RBCL, Solyc07g021200 | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g062540.3.1 | RBCL, Solyc12g062540 | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g062550.1.1 | RBCL, Solyc12g062550 | Ribulose bisphosphate carboxylase large chain OS=Solanum... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002755_P001 | RBCL, Zm00001e002755 | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031080_P001 | RBCL, Zm00001e031080 | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e042029_P001 | RBCL, Zm00001e042029 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042051_P001 | RBCL, Zm00001e042051 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042083_P001 | RBCL, Zm00001e042083 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042095_P001 | RBCL, Zm00001e042095 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042403_P001 | RBCL, Zm00001e042403 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0015977 | carbon fixation | IEA | Interproscan |
| MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| No external refs found! |
