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  5. Dde_g01672

Dde_g01672


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g01672

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Als_g30704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39842 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26081 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14898 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47300 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010995 No alias not classified & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024096 OTP86 not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55586 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 145 168
IPR002885 Pentatricopeptide_repeat 382 407
IPR002885 Pentatricopeptide_repeat 72 102
IPR002885 Pentatricopeptide_repeat 410 440
IPR002885 Pentatricopeptide_repeat 274 304
IPR002885 Pentatricopeptide_repeat 482 504
IPR002885 Pentatricopeptide_repeat 170 217
IPR002885 Pentatricopeptide_repeat 306 353
IPR046848 E_motif 527 587
IPR032867 DYW_dom 623 713
No external refs found!