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  5. Dde_g01770

Dde_g01770 (AtABCC2, ABCC2,...)


Aliases : AtABCC2, ABCC2, ATMRP2, EST4, MRP2

Description : glutathione S-conjugate transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g01770

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09685.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30341.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0245.g059970 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.2 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.191 ATMRP12, MRP12, ABCC11 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre17.g734612 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g09054 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10363 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21228 ATMRP8, MRP8, ABCC6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os06g08560.1 MRP11, ABCC13,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
MA_10426119g0010 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14029 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37519 ABCC3, ATMRP3, MRP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07631 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004099 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: CDS=1-3957 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008921 ATABCC5, MRP5,... subfamily ABCC transporter & original description: CDS=494-5017 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 300 567
IPR011527 ABC1_TM_dom 919 1161
IPR003439 ABC_transporter-like_ATP-bd 1257 1403
IPR003439 ABC_transporter-like_ATP-bd 629 764
No external refs found!