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  5. Dde_g04465

Dde_g04465 (HAF01, HAC13, TAF1, HAF1, GTD1)


Aliases : HAF01, HAC13, TAF1, HAF1, GTD1

Description : component *(HAF/TAF1) of SAGA transcription co-activator complex & original description: none


Gene families : OG0003088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04465

Target Alias Description ECC score Gene Family Method Actions
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.03 OrthoFinder output from all 47 species
Aspi01Gene49971.t1 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.20 HAF01, HAC13,... RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Cre10.g425501 HAF01, HAC13,... Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Dcu_g03217 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Tin_g11474 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009067 TAF_II_230-bd 4 46
IPR022591 TAF1_HAT_dom 585 1157
IPR000626 Ubiquitin-like_dom 671 741
IPR001487 Bromodomain 1808 1883
No external refs found!