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  5. Dde_g06290

Dde_g06290 (PSBW)


Aliases : PSBW

Description : component *(PsbW) of PS-II complex & original description: none


Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06290
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Als_g56334 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00627 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01886 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04368 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036277001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
LOC_Os01g56680.2 PSBW, LOC_Os01g56680 component PsbW of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g43310.1 PSBW, LOC_Os05g43310 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
Lfl_g00156 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431532g0010 PSBW component PsbW of PS-II complex 0.02 OrthoFinder output from all 47 species
Msp_g20236 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20237 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12705 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11136 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g084050.4.1 PSBW, Solyc06g084050 component PsbW of PS-II complex 0.02 OrthoFinder output from all 47 species
Spa_g23538 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24382 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24383 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027386_P002 PSBW, Zm00001e027386 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 1 133
No external refs found!