Lfl_g16402

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g16402

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.01	OrthoFinder output from all 47 species
AT4G00940	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT4G21030	ATDOF4;2, ATDOF4.2	Dof-type zinc finger domain-containing protein	0.01	OrthoFinder output from all 47 species
AT5G60850	OBP4	OBF binding protein 4	0.01	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11020	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02136	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12576	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18797	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g25388	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0166.g054389	TMO6	transcription factor *(DOF) & original description: CDS=1-1341	0.01	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.03	OrthoFinder output from all 47 species
Dac_g16470	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g16737	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g29273	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14972	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01007992001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Gb_20867	CDF3	Cyclic dof factor 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os01g55340.1	LOC_Os01g55340	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
MA_459791g0010	TMO6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
MA_74014g0010	No alias	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Nbi_g03668	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g11267	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17090	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25217	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30866	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32243	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g12534	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18526	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g24818	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g60948	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g11127	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g06804	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07474	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32548	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=453-2084	0.02	OrthoFinder output from all 47 species
Solyc01g096120.3.1	DAG1, Solyc01g096120	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc04g070960.3.1	Solyc04g070960	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Tin_g08597	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	56	112

External Links

No external refs found!

Lfl_g16402

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation