Description : histone demethylase *(KDM5) & original description: none
Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00253500 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G63490 | No alias | transcription factor jumonji (jmjC) domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62631 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07179 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023517001 | PKDM7D | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434186g0010 | PKDM7D | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g20340.1 | PKDM7D | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019787 | Znf_PHD-finger | 1740 | 1800 |
| IPR019787 | Znf_PHD-finger | 247 | 293 |
| IPR004198 | Znf_C5HC2 | 629 | 681 |
| IPR001606 | ARID_dom | 101 | 189 |
| IPR003347 | JmjC_dom | 419 | 535 |
| IPR003349 | JmjN | 31 | 64 |
| IPR013637 | Lys_sp_deMease-like_dom | 729 | 960 |
| IPR013637 | Lys_sp_deMease-like_dom | 965 | 1208 |
| IPR013637 | Lys_sp_deMease-like_dom | 1145 | 1432 |
| No external refs found! |
