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  5. Dde_g06636

Dde_g06636 (ATMIXTA, MYB16, ATMYB16)


Aliases : ATMIXTA, MYB16, ATMYB16

Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06636

Target Alias Description ECC score Gene Family Method Actions
AT1G18710 MYB47, AtMYB47 myb domain protein 47 0.02 OrthoFinder output from all 47 species
AT1G66370 AtMYB113, MYB113 myb domain protein 113 0.03 OrthoFinder output from all 47 species
AT1G66390 PAP2, ATMYB90, MYB90 myb domain protein 90 0.03 OrthoFinder output from all 47 species
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.02 OrthoFinder output from all 47 species
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 OrthoFinder output from all 47 species
Adi_g069198 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ceric.13G061300.1 MYB106, NOK,... not classified & original description: pacid=50636308... 0.02 OrthoFinder output from all 47 species
GSVIVT01028981001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_13117 AtMYB93, MYB93 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_19333 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_21264 ATMYB5, MYB5 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Gb_22884 MYB6, AtMYB6 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09590.1 ATMYB38, MYB38,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55300.1 LOC_Os03g55300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g38740.1 MYB106, NOK,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g15258 AtMYB107, MYB107 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428747g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_173523g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_66255g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_83918g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_93127g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Ppi_g63855 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067340.4.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc02g079280.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g088190.4.1 MYB106, NOK,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g075660.4.1 ATMYB48-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e002893_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e016072_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!