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  5. Dde_g06996

Dde_g06996


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06996

Target Alias Description ECC score Gene Family Method Actions
AT5G51590 No alias AT hook motif DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g021113 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11623 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22194 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29441 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22653.t1 Aspi01Gene22653 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63974.t1 ATAHL1, AHL1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11337 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14342 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g24172 ATAHL1, AHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31340 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45074 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13288 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10262 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63115 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03141 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09590 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12001 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57591 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010139 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo410086 No alias AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 174 287
No external refs found!