Aliases : REME1
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00137550 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00137p00065490 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g004476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099216 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g23881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g34145 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02416 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27912 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06903 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07895 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g28698 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36381 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene27806.t1 | CRR2, Aspi01Gene27806 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007676 | No alias | not classified & original description: CDS=1-2364 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036354 | CRR22 | not classified & original description: CDS=140-2386 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043395 | No alias | not classified & original description: CDS=1-2703 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0175.g055975 | No alias | not classified & original description: CDS=1-4965 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1704.g105987 | No alias | not classified & original description: CDS=1-2742 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05254 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07471 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07730 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19902 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20647 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29784 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77657 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g77967 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G042700.1 | Ceric.32G042700 | not classified & original description: pacid=50598057... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07762 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g15357 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g40777 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g43242 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g43330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45932 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47933 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03965 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15886 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22326 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08128 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19000 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54496 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g38362 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10138132g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_184088g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_935792g0010 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
| Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06015 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28789 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g30522 | OTP81 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g34019 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g36833 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41132 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41408 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04943 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g12551 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35704 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g05695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12777 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g59977 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07539 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41679 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g46657 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0081.g017989 | No alias | not classified & original description: CDS=1-1851 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g04999 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16575 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28758 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g29520 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo99647 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g13891 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g14568 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18928 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g19054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21861 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g21942 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g23960 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g28119 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g28134 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g41901 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g44964 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g45256 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g14912 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g43987 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 451 | 504 |
| IPR002885 | Pentatricopeptide_repeat | 307 | 332 |
| IPR002885 | Pentatricopeptide_repeat | 407 | 433 |
| IPR002885 | Pentatricopeptide_repeat | 133 | 160 |
| IPR002885 | Pentatricopeptide_repeat | 105 | 132 |
| IPR002885 | Pentatricopeptide_repeat | 206 | 228 |
| IPR002885 | Pentatricopeptide_repeat | 333 | 380 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 280 |
| No external refs found! |
