Dde_g10509


Description : SSU processome assembly factor *(UTP10) & original description: none


Gene families : OG0003994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g10509

Target Alias Description ECC score Gene Family Method Actions
Adi_g117341 No alias SSU processome assembly factor *(UTP10) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0335.g065507 No alias SSU processome assembly factor *(UTP10) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07784 No alias SSU processome assembly factor *(UTP10) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46310.1 LOC_Os04g46310 SSU processome assembly factor (UTP10) 0.03 OrthoFinder output from all 47 species
Solyc03g093480.3.1 Solyc03g093480 SSU processome assembly factor (UTP10) 0.03 OrthoFinder output from all 47 species
Tin_g20111 No alias SSU processome assembly factor *(UTP10) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016831_P001 Zm00001e016831 SSU processome assembly factor (UTP10) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012954 BP28_C_dom 1838 2008
IPR022125 U3snoRNP10_N 235 356
No external refs found!