Dde_g10795 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g10795

Target	Alias	Description	ECC score	Gene Family Method
AT1G66160	CMPG1, ATCMPG1	CYS, MET, PRO, and GLY protein 1	0.03	OrthoFinder output from all 47 species
AT3G11840	PUB24	plant U-box 24	0.02	OrthoFinder output from all 47 species
Aev_g05258	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02187	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g20026	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04774	PUB25	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19337.t2	PUB26, Aspi01Gene19337	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19375.t1	PUB26, Aspi01Gene19375	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene22942.t1	PUB26, Aspi01Gene22942	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g04516	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g39747	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Gb_02628	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_11650	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os02g34410.1	PUB25, LOC_Os02g34410	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g46500.1	PUB23, LOC_Os02g46500	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g58920.1	PUB23, LOC_Os04g58920	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g01810	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g16219	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Msp_g12974	PUB25	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01051	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04802	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g19356	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06864	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093	PUB23	not classified & original description: CDS=1-1278	0.04	OrthoFinder output from all 47 species
Solyc04g008100.3.1	Solyc04g008100	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g00706	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e036030_P001	Zm00001e036030	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e038657_P001	Zm00001e038657	U-box domain-containing protein 75 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051118	glucan endo-1,3-alpha-glucosidase activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	18	89

External Links

No external refs found!

Dde_g10795 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation