Dde_g10800 (UBP23)

Aliases : UBP23

Description : not classified & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g10800

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00135p00021060	UBP16,...	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
AT4G17895	UBP20	ubiquitin-specific protease 20	0.02	OrthoFinder output from all 47 species
Adi_g060737	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15601	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54061.t1	UBP23, Aspi01Gene54061	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03145	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21786	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26924	UBP25	deubiquitinase *(UBP25) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01000696001	UBP15	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Gb_09344	UBP15	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os02g14730.1	UBP15, LOC_Os02g14730	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Lfl_g10823	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
MA_834843g0010	UBP20	Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Pnu_g13940	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19055	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024898	UBP23	not classified & original description: CDS=166-2922	0.03	OrthoFinder output from all 47 species
Spa_g08010	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	HCCA
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	HCCA
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006282	regulation of DNA repair	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	136	440

External Links

No external refs found!

Dde_g10800 (UBP23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation