Description : ribosome biogenesis factor *(CRASS) & original description: none
Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g11519 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00224760 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT5G14910 | No alias | Heavy metal transport/detoxification superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g112181 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02821 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g13367 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g04787 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g06536 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060247 | No alias | ribosome biogenesis factor *(CRASS) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G033000.1 | Ceric.01G033000 | ribosome biogenesis factor *(CRASS) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36209 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g05290 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032527001 | No alias | No description available | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g27100.1 | LOC_Os05g27100 | ribosome biogenesis factor (CRASS) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14822 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g37391 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_59576g0010 | No alias | ribosome biogenesis factor (CRASS) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g04290.1 | No alias | ribosome biogenesis factor (CRASS) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g44614 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05841 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c1_25290V3.1 | Pp3c1_25290 | Heavy metal transport/detoxification superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00577 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g13303 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g087150.3.1 | Solyc02g087150 | ribosome biogenesis factor (CRASS) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g10440 | No alias | ribosome biogenesis factor *(CRASS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031534_P001 | Zm00001e031534 | ribosome biogenesis factor (CRASS) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
