Dde_g12346


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g12346

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g052049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g105531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18197 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g27894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23472.t2 CRR22, Aspi01Gene23472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0383.g067429 No alias not classified & original description: CDS=1-1644 0.05 OrthoFinder output from all 47 species
Cba_g47996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G048900.1 Ceric.04G048900 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.03 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.03 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.04 OrthoFinder output from all 47 species
Ceric.39G023200.1 CRR2, Ceric.39G023200 not classified & original description: pacid=50582462... 0.05 OrthoFinder output from all 47 species
Dcu_g32153 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g43746 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28225 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46770.1 LOC_Os07g46770 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25859 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33296 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45751 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23480 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27667 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44143 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g57693 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g31006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006421 No alias not classified & original description: CDS=1-675 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018685 No alias not classified & original description: CDS=1-1332 0.04 OrthoFinder output from all 47 species
Spa_g07192 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 161 208
IPR002885 Pentatricopeptide_repeat 565 611
IPR002885 Pentatricopeptide_repeat 362 410
IPR002885 Pentatricopeptide_repeat 262 306
IPR002885 Pentatricopeptide_repeat 464 511
IPR002885 Pentatricopeptide_repeat 633 663
IPR002885 Pentatricopeptide_repeat 104 127
No external refs found!