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  5. Dde_g13120

Dde_g13120


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18516 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014539001 PBP1 Calcium-binding protein KRP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30618 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g01599 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36268 PBP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g41840 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 71 119
No external refs found!