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  5. Dde_g13576

Dde_g13576 (BBC1, RSU2, ATBBC1)


Aliases : BBC1, RSU2, ATBBC1

Description : component *(eL13) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g13576

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00239970 BBC1, RSU2,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.03 OrthoFinder output from all 47 species
AT5G23900 No alias Ribosomal protein L13e family protein 0.04 OrthoFinder output from all 47 species
Adi_g014304 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g124336 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g41609 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g44001 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g02719 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g03708 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.21G071200.1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01027212001 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01030767001 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02510.2 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_10430790g0030 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g04920.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g19790.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g00929 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ore_g11184 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_26280V3.1 BBC1, RSU2,... breast basic conserved 1 0.02 OrthoFinder output from all 47 species
Ppi_g14663 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g19558 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024435 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo165483 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Smo266648 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc08g075700.3.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc12g096150.2.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Tin_g03031 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e018804_P001 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e028430_P003 BBC1, RSU2,... component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 6 184
No external refs found!