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  5. Dde_g14059

Dde_g14059 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g14059
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 OrthoFinder output from all 47 species
Adi_g007240 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22695 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32589 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17770 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40542 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15317 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06266 ATEXPA4, ATEXP4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31511 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21820.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os08g44790.1 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40090.1 ATHEXP BETA 1.4,... Expansin-B9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g11130 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22081 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35332 ATEXPA11, ATHEXP... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g09956 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06079 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14092 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20451 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33848 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34219 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40748 ATEXPA10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59568 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.02 OrthoFinder output from all 47 species
Pp3c7_26000V3.1 EXPB3, ATEXPB3,... expansin B3 0.02 OrthoFinder output from all 47 species
Sam_g29879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g081210.3.1 ATEXP13,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g09301 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25448 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003888_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e003889_P001 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e033407_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036693_P001 EXPA18, EXP18,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e041519_P002 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 66 151
IPR007117 Expansin_CBD 162 239
No external refs found!