Lfl_g17171


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17171
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.02 OrthoFinder output from all 47 species
Aob_g36114 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18320 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g32420.1 LOC_Os02g32420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33030.1 LOC_Os04g33030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_24642g0020 ACN1, AAE7 Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 OrthoFinder output from all 47 species
Ore_g34930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09267 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13958 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006458 SBP1 not classified & original description: CDS=717-1820 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023032 No alias not classified & original description: CDS=75-1241 0.03 OrthoFinder output from all 47 species
Spa_g06772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005184_P001 Zm00001e005184 BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e008274_P001 Zm00001e008274 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024196_P001 RING, Zm00001e024196 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!