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  5. Lfl_g17180

Lfl_g17180


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17180

Target Alias Description ECC score Gene Family Method Actions
AT4G25990 CIL CCT motif family protein 0.03 OrthoFinder output from all 47 species
AT5G57180 CIA2 chloroplast import apparatus 2 0.03 OrthoFinder output from all 47 species
Adi_g099497 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34755 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01755 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08686 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58206.t1 Aspi01Gene58206 CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20220 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G076600.1 Ceric.16G076600 not classified & original description: pacid=50589566... 0.06 OrthoFinder output from all 47 species
Ehy_g08483 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15330.1 LOC_Os06g15330 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Len_g09104 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17788 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Zm00001e030952_P002 Zm00001e030952 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 19 63
IPR010402 CCT_domain 510 546
No external refs found!