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  5. Dde_g15070

Dde_g15070 (HSFB4, SCZ, AT-HSFB4)


Aliases : HSFB4, SCZ, AT-HSFB4

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g15070

Target Alias Description ECC score Gene Family Method Actions
Aev_g18842 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41017 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09418 ATHSFA1D, HSFA1D HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48723 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25683 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08806 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G078200.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g20865 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05885 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g53220.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g13800.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc03g097120.3.1 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 OrthoFinder output from all 47 species
Solyc06g053950.3.1 AT-HSFA6B,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g053960.3.1 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc07g040680.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Spa_g10058 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032930_P002 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 41 130
No external refs found!