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  5. Lfl_g17313

Lfl_g17313 (BGAL1)


Aliases : BGAL1

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17313
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00054750 BGAL13,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AT2G28470 BGAL8 beta-galactosidase 8 0.03 OrthoFinder output from all 47 species
AT2G32810 BGAL9 beta galactosidase 9 0.04 OrthoFinder output from all 47 species
Ala_g27976 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09977 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018853001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01022339001 BGAL10 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01024031001 BGAL13 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01024221001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01025170001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
Gb_41532 BGAL10 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os01g39830.1 BGAL1, LOC_Os01g39830 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g12730.1 BGAL1, LOC_Os02g12730 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
LOC_Os03g06940.1 BGAL3, LOC_Os03g06940 beta-galactosidase (BGAL) 0.06 OrthoFinder output from all 47 species
LOC_Os03g15020.1 BGAL8, LOC_Os03g15020 beta-galactosidase (BGAL) 0.01 OrthoFinder output from all 47 species
LOC_Os09g36810.1 BGAL13, LOC_Os09g36810 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
LOC_Os10g19960.1 BGAL7, LOC_Os10g19960 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Len_g37627 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427427g0010 BGAL1 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
MA_10436863g0010 BGAL10 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_11388g0010 BGAL1 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_168609g0010 BGAL12 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
MA_329922g0010 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
MA_665188g0010 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Nbi_g04951 BGAL1 EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011417 BGAL1 EC_3.2 glycosylase & original description: CDS=435-2606 0.04 OrthoFinder output from all 47 species
Sam_g25743 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26543 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g111540.4.1 BGAL13, Solyc01g111540 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Solyc07g042220.2.1 BGAL15, Solyc07g042220 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc11g018490.3.1 BGAL16, Solyc11g018490 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Spa_g02223 BGAL1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10280 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000496_P002 BGAL3, Zm00001e000496 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Zm00001e010258_P001 BGAL11, Zm00001e010258 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Zm00001e035986_P002 BGAL11, Zm00001e035986 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Zm00001e039014_P001 BGAL3, Zm00001e039014 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 57 360
IPR041392 GHD 376 439
IPR000922 Lectin_gal-bd_dom 786 863
No external refs found!