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  5. Dde_g16071

Dde_g16071


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g16071
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Aev_g43986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55316 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08252 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10753 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68117 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69562 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69569 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038619 No alias not classified & original description: CDS=1-4530 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.04 OrthoFinder output from all 47 species
Azfi_s0264.g060909 EMB2758 not classified & original description: CDS=1-2373 0.04 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g13830.1 LOC_Os03g13830 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g12521 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57366 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo122489 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
Spa_g14016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 155 195
IPR002885 Pentatricopeptide_repeat 35 82
IPR002885 Pentatricopeptide_repeat 110 134
No external refs found!