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  5. Lfl_g17369

Lfl_g17369


Description : not classified & original description: none


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g17369

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00237190 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00072310 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.04 OrthoFinder output from all 47 species
AT1G07920 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from all 47 species
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.05 OrthoFinder output from all 47 species
Adi_g048689 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Aev_g06624 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aev_g07757 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ala_g31488 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.06 OrthoFinder output from all 47 species
Als_g11645 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Als_g26660 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Als_g31007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07256 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Aop_g20702 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Cba_g08954 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Ceric.02G025200.1 Ceric.02G025200 not classified & original description: pacid=50584751... 0.03 OrthoFinder output from all 47 species
Ceric.06G056100.1 Ceric.06G056100 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Ceric.11G084400.1 Ceric.11G084400 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.06 OrthoFinder output from all 47 species
Ceric.31G073700.1 Ceric.31G073700 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Cre12.g498600 No alias Elongation factor 1-alpha OS=Glycine max 0.01 OrthoFinder output from all 47 species
Dac_g22627 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Dac_g40329 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04717 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01014488001 No alias Elongation factor 1-alpha OS=Manihot esculenta 0.03 OrthoFinder output from all 47 species
GSVIVT01025638001 No alias Elongation factor 1-alpha OS=Zea mays 0.03 OrthoFinder output from all 47 species
LOC_Os03g08010.1 LOC_Os03g08010 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08020.1 LOC_Os03g08020 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08050.1 LOC_Os03g08050 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Len_g28220 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Len_g55835 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g07312 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g07927 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g27478 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
MA_101560g0010 No alias Elongation factor 1-alpha OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
MA_651220g0010 No alias Elongation factor 1-alpha OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_781870g0010 No alias Elongation factor 1-alpha OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
Mp3g03620.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 OrthoFinder output from all 47 species
Mp6g00950.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Mp6g17700.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Mp6g17720.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Mp6g18130.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Msp_g06564 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Msp_g29578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34336 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g07364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19657 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Pir_g29386 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Pir_g29775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16998 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16999 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g28089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39768 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g49146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.02 OrthoFinder output from all 47 species
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.02 OrthoFinder output from all 47 species
Solyc06g005060.3.1 Solyc06g005060 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Solyc06g009970.3.1 Solyc06g009970 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Solyc11g150146.1.1 Solyc11g150146 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Spa_g08926 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Spa_g18945 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Spa_g24424 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.07 OrthoFinder output from all 47 species
Spa_g24425 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Spa_g33152 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e026762_P001 Zm00001e026762 aminoacyl-tRNA binding factor (eEF1A) 0.07 OrthoFinder output from all 47 species
Zm00001e026763_P003 Zm00001e026763 aminoacyl-tRNA binding factor (eEF1A) 0.06 OrthoFinder output from all 47 species
Zm00001e030598_P002 Zm00001e030598 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Zm00001e031390_P004 Zm00001e031390 aminoacyl-tRNA binding factor (eEF1A) 0.07 OrthoFinder output from all 47 species
Zm00001e031391_P002 Zm00001e031391 aminoacyl-tRNA binding factor (eEF1A) 0.05 OrthoFinder output from all 47 species
Zm00001e031407_P001 Zm00001e031407 aminoacyl-tRNA binding factor (eEF1A) 0.07 OrthoFinder output from all 47 species
Zm00001e037355_P001 Zm00001e037355 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 2 93
No external refs found!