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  5. Dde_g16099

Dde_g16099


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g16099

Target Alias Description ECC score Gene Family Method Actions
Adi_g014778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58744.t1 EMB2758, Aspi01Gene58744 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046677 CRR2 not classified & original description: CDS=1-1557 0.04 OrthoFinder output from all 47 species
Cba_g19059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58731 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.04 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.04 OrthoFinder output from all 47 species
Ceric.21G084300.1 OTP86, Ceric.21G084300 not classified & original description: pacid=50604215... 0.04 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.04 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.03 OrthoFinder output from all 47 species
Ceric.29G051600.1 Ceric.29G051600 not classified & original description: pacid=50625199... 0.05 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.04 OrthoFinder output from all 47 species
Dac_g12916 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28556 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03909 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24038 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018953 No alias not classified & original description: CDS=533-943 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022846 No alias not classified & original description: CDS=1-2226 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026929 No alias not classified & original description: CDS=1-2745 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo105729 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12946 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19369 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20467 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57231 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41078 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 326
IPR002885 Pentatricopeptide_repeat 607 633
IPR002885 Pentatricopeptide_repeat 429 476
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 532 579
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 225 272
No external refs found!