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  5. Dde_g16396

Dde_g16396


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g16396
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08601.t1 Aspi01Gene08601 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42676.t1 Aspi01Gene42676 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000903 EMB2261 not classified & original description: CDS=1-2043 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.05 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.04 OrthoFinder output from all 47 species
Ceric.13G062400.1 Ceric.13G062400 not classified & original description: pacid=50636814... 0.04 OrthoFinder output from all 47 species
Ceric.22G004400.1 Ceric.22G004400 not classified & original description: pacid=50613941... 0.03 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.101 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15324 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63503 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015410 No alias not classified & original description: CDS=1-2730 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo110422 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
Zm00001e030605_P001 Zm00001e030605 Pentatricopeptide repeat-containing protein At1g31430... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 80 127
IPR002885 Pentatricopeptide_repeat 388 433
IPR002885 Pentatricopeptide_repeat 259 283
No external refs found!