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  5. Dde_g17270

Dde_g17270 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17270

Target Alias Description ECC score Gene Family Method Actions
Als_g05980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.05 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.05 OrthoFinder output from all 47 species
Dac_g27114 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 204 263
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 383 430
IPR002885 Pentatricopeptide_repeat 79 126
IPR002885 Pentatricopeptide_repeat 155 181
IPR002885 Pentatricopeptide_repeat 458 482
No external refs found!