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  5. Dde_g17720

Dde_g17720


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17720

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18197 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05430 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07468 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38666 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61086 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32690 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36874 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67763 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68117 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02312.t1 Aspi01Gene02312 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t1 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.07 OrthoFinder output from all 47 species
Azfi_s0264.g060909 EMB2758 not classified & original description: CDS=1-2373 0.02 OrthoFinder output from all 47 species
Cba_g19054 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19771 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67900 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dcu_g08566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43746 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g04514 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16479 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61681 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42323 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42940 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.03 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo122489 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo127736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Spa_g01968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07311 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50618 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31798 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 727 751
IPR002885 Pentatricopeptide_repeat 424 449
IPR002885 Pentatricopeptide_repeat 626 652
IPR002885 Pentatricopeptide_repeat 323 347
IPR002885 Pentatricopeptide_repeat 655 681
IPR002885 Pentatricopeptide_repeat 550 597
IPR002885 Pentatricopeptide_repeat 349 395
IPR002885 Pentatricopeptide_repeat 247 294
IPR002885 Pentatricopeptide_repeat 146 194
IPR002885 Pentatricopeptide_repeat 450 496
IPR002885 Pentatricopeptide_repeat 753 800
No external refs found!