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  5. Dde_g18823

Dde_g18823


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g18823

Target Alias Description ECC score Gene Family Method Actions
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38958.t1 Aspi01Gene38958 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0474.g072983 No alias not classified & original description: CDS=1-2562 0.04 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.04 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.03 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43531 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Gb_18263 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_19693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_40766 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.02 OrthoFinder output from all 47 species
Len_g02881 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32845 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100519g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g36747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45771 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27953 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58717 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63391 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g16300 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46357 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48708 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 479 508
IPR002885 Pentatricopeptide_repeat 653 674
IPR002885 Pentatricopeptide_repeat 176 206
IPR002885 Pentatricopeptide_repeat 552 577
IPR002885 Pentatricopeptide_repeat 451 476
IPR002885 Pentatricopeptide_repeat 148 174
IPR002885 Pentatricopeptide_repeat 375 422
IPR002885 Pentatricopeptide_repeat 274 323
IPR046848 E_motif 695 757
IPR002885 Pentatricopeptide_repeat 584 624
No external refs found!