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  5. Dde_g19391

Dde_g19391 (CDF2)


Aliases : CDF2

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g19391

Target Alias Description ECC score Gene Family Method Actions
AT1G47655 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G39660 CDF2 cycling DOF factor 2 0.03 OrthoFinder output from all 47 species
Adi_g012792 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075098 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11360 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13677 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16400 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18797 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25388 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26374.t1 Aspi01Gene26374 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66325.t1 OBP3, Aspi01Gene66325 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033832 CDF3 transcription factor *(DOF) & original description: CDS=354-1853 0.08 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.03 OrthoFinder output from all 47 species
Cba_g19275 CDF3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72531 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29273 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40320 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12009 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18747 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01011138001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Gb_23562 OBP3 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g15900.1 CDF2, LOC_Os01g15900 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g26620.1 CDF1, LOC_Os10g26620 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43089 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870 TMO6 transcription factor *(DOF) & original description: CDS=1-1464 0.03 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g49511 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01918 OBP4 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08597 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10128 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14914 No alias transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e006527_P001 Zm00001e006527 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.08 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e027411_P001 Zm00001e027411 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 145 201
No external refs found!