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  5. Dde_g19882

Dde_g19882


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g19882

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 ADAP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00216470 RAP2.7, TOE1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.03 OrthoFinder output from all 47 species
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g056777 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g39456 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010452 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G003200.1 RAP2.7, TOE1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cre17.g729600 RAP2.2 No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g60430.2 AP2, FLO2, FL1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
LOC_Os06g43220.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os07g39110.2 LOC_Os07g39110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g03540.1 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014417 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g13728 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006752_P001 AP2, FLO2, FL1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e011539_P001 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 195 246
IPR001471 AP2/ERF_dom 93 152
No external refs found!