Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00105050 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G45030 | No alias | Ribosomal protein S10p/S20e family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT3G47370 | No alias | Ribosomal protein S10p/S20e family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G62300 | No alias | Ribosomal protein S10p/S20e family protein | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g32242 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23202 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G040000.1 | Ceric.10G040000 | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G056300.1 | Ceric.35G056300 | component *(uS10) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000842.28 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g660150 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g24923 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01018553001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g14530.1 | LOC_Os03g14530 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g04290.1 | LOC_Os06g04290 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08930.1 | LOC_Os10g08930 | component RPS20 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_103406g0010 | No alias | component RPS20 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429759g0010 | No alias | component RPS20 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g09440.1 | No alias | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24561 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g45562 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57765 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c1_21860V3.1 | Pp3c1_21860 | Ribosomal protein S10p/S20e family protein | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14098 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23471 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo115495 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g096580.3.1 | Solyc01g096580 | component RPS20 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g27726 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26346 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001045_P001 | Zm00001e001045 | component RPS20 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038574_P001 | Zm00001e038574 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027486 | Ribosomal_S10_dom | 50 | 144 |
| No external refs found! |
