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  5. Dde_g22308

Dde_g22308


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g22308
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26153 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10753 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054647 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s1010.g095171 No alias not classified & original description: CDS=1-2025 0.05 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.04 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.04 OrthoFinder output from all 47 species
Ceric.13G050700.1 Ceric.13G050700 not classified & original description: pacid=50636181... 0.05 OrthoFinder output from all 47 species
Ceric.13G062400.1 Ceric.13G062400 not classified & original description: pacid=50636814... 0.04 OrthoFinder output from all 47 species
Dac_g04683 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28796 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43591 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27667 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13330 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000499 CRR22 EC_2.4 glycosyltransferase & original description: CDS=1-2862 0.02 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Spa_g09909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27708 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 107 128
IPR002885 Pentatricopeptide_repeat 5 26
IPR002885 Pentatricopeptide_repeat 31 77
IPR002885 Pentatricopeptide_repeat 132 180
IPR002885 Pentatricopeptide_repeat 234 281
No external refs found!