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  5. Dde_g22546

Dde_g22546


Description : component *(uS7m) of small mitoribosomal-subunit proteome & original description: none


Gene families : OG0003075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g22546
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
ATCG00900 RPS7.1, RPS7 Ribosomal protein S7p/S5e family protein 0.04 OrthoFinder output from all 47 species
ATCG01240 RPS7.2 ribosomal protein S7 0.04 OrthoFinder output from all 47 species
Aev_g27286 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g13505 No alias component *(uS7m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g15514 No alias component *(uS7m) of small mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cba_g25480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G043200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.09G049800.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.18G054300.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.22G078200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.29G003200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os04g16856.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os04g16886.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os07g25002.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os08g15246.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os10g21372.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g01016 No alias component *(uS7m) of small mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g03137 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g06400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22080 No alias component *(uS7m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pir_g04718 No alias component *(uS7m) of small mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g00356 No alias component *(uS7m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g03315 No alias component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g02161 No alias component *(uS7m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Spa_g19770 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g12479 No alias component *(uS7m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 71 209
No external refs found!