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  5. Dde_g22864

Dde_g22864


Description : not classified & original description: none


Gene families : OG0004236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g22864
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00149950 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AT3G06980 No alias DEA(D/H)-box RNA helicase family protein 0.06 OrthoFinder output from all 47 species
Adi_g056846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64106.t1 Aspi01Gene64106 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G050700.1 Ceric.28G050700 not classified & original description: pacid=50570551... 0.03 OrthoFinder output from all 47 species
Dcu_g07014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017719001 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01830.1 LOC_Os03g01830 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Lfl_g37545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66303 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g30132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039095_P002 Zm00001e039095 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 563 679
IPR011545 DEAD/DEAH_box_helicase_dom 342 515
No external refs found!