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  5. Dde_g23096

Dde_g23096 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g23096

Target Alias Description ECC score Gene Family Method Actions
Smo444049 DCL1, CAF,... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.02 OrthoFinder output from all 47 species
Smo74321 DCL4, ATDCL4 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 1325 1480
IPR000999 RNase_III_dom 1556 1669
IPR003100 PAZ_dom 1156 1288
IPR006935 Helicase/UvrB_N 193 364
IPR001650 Helicase_C 601 718
No external refs found!