Dde_g24679


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g24679

Target Alias Description ECC score Gene Family Method Actions
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034274 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34933 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046172 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z090000.1 Ceric.1Z090000 not classified & original description: pacid=50604599... 0.03 OrthoFinder output from all 47 species
Ceric.34G009600.1 Ceric.34G009600 not classified & original description: pacid=50623440... 0.03 OrthoFinder output from all 47 species
Dac_g18994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.02 OrthoFinder output from all 47 species
Len_g34151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20168g0010 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.02 OrthoFinder output from all 47 species
Nbi_g06939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07991 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03104 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04430 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17070 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19088 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59100 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000499 CRR22 EC_2.4 glycosyltransferase & original description: CDS=1-2862 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005639 No alias CDP-diacylglycerol phosphatidylserine synthase &... 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.02 OrthoFinder output from all 47 species
Spa_g14545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 506 551
IPR002885 Pentatricopeptide_repeat 301 346
IPR002885 Pentatricopeptide_repeat 405 451
IPR002885 Pentatricopeptide_repeat 99 146
IPR002885 Pentatricopeptide_repeat 201 248
No external refs found!