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  5. Dde_g24810

Dde_g24810 (GR-RBP3)


Aliases : GR-RBP3

Description : RNA editing factor *(ORRM3) & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g24810

Target Alias Description ECC score Gene Family Method Actions
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.02 OrthoFinder output from all 47 species
Adi_g016828 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082209 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01139 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009417 No alias not classified & original description: CDS=1-471 0.03 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10857 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44420 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G018200.1 Ceric.12G018200 RNA chaperone *(RZ1) & original description:... 0.05 OrthoFinder output from all 47 species
Cre02.g079400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09095 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06280 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06493 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g14326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16014 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g17454.1 GR-RBP3, LOC_Os10g17454 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011440_P001 Zm00001e011440 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 34 104
No external refs found!