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  5. Dde_g25009

Dde_g25009


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g25009
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37112 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008952 No alias not classified & original description: CDS=1-2550 0.04 OrthoFinder output from all 47 species
Azfi_s0029.g024142 No alias not classified & original description: CDS=203-3646 0.04 OrthoFinder output from all 47 species
Cba_g05314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20710 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20769 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
Len_g17360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05734 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27636 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38636 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014176 No alias not classified & original description: CDS=1-2259 0.03 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Spa_g14145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 454 500
IPR002885 Pentatricopeptide_repeat 557 603
IPR002885 Pentatricopeptide_repeat 353 390
IPR032867 DYW_dom 778 862
IPR002885 Pentatricopeptide_repeat 327 350
IPR002885 Pentatricopeptide_repeat 254 283
IPR002885 Pentatricopeptide_repeat 697 717
IPR002885 Pentatricopeptide_repeat 428 448
IPR002885 Pentatricopeptide_repeat 631 655
No external refs found!