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  5. Dde_g25806

Dde_g25806


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g25806
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Adi_g004477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075673 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26204 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63387.t1 Aspi01Gene63387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062299 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=94-1002 0.03 OrthoFinder output from all 47 species
Cba_g19280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25034 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.03 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g08934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04936 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g16117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 502 548
IPR002885 Pentatricopeptide_repeat 99 146
IPR002885 Pentatricopeptide_repeat 199 247
IPR002885 Pentatricopeptide_repeat 300 349
IPR002885 Pentatricopeptide_repeat 404 430
IPR002885 Pentatricopeptide_repeat 576 600
IPR002885 Pentatricopeptide_repeat 376 399
No external refs found!