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  5. Dde_g26885

Dde_g26885


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g26885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002434 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022409 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03252 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18790 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09035 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07004 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10779.t1 CRR22, Aspi01Gene10779 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Azfi_s0005.g008963 No alias not classified & original description: CDS=1-2157 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023878 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024983 No alias not classified & original description: CDS=1-3423 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033714 CRR22 not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036580 No alias not classified & original description: CDS=1-1665 0.02 OrthoFinder output from all 47 species
Azfi_s0148.g053129 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Azfi_s0398.g068192 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2229 0.03 OrthoFinder output from all 47 species
Cba_g02701 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46044 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.02 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.02 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.03 OrthoFinder output from all 47 species
Ceric.21G046800.1 Ceric.21G046800 not classified & original description: pacid=50603820... 0.04 OrthoFinder output from all 47 species
Ceric.27G036800.1 VAC1, ECB2,... not classified & original description: pacid=50605276... 0.03 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.01 OrthoFinder output from all 47 species
Ceric.29G017900.1 Ceric.29G017900 not classified & original description: pacid=50624370... 0.04 OrthoFinder output from all 47 species
Ceric.31G002400.1 Ceric.31G002400 not classified & original description: pacid=50574432... 0.03 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.03 OrthoFinder output from all 47 species
Ceric.36G028800.1 Ceric.36G028800 not classified & original description: pacid=50568963... 0.03 OrthoFinder output from all 47 species
Ceric.39G045800.1 VAC1, ECB2,... not classified & original description: pacid=50583112... 0.03 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29399 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42982 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17237 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43123 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.01 OrthoFinder output from all 47 species
GSVIVT01022230001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
GSVIVT01037377001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.02 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.01 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g45824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_40997g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Msp_g05393 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31423 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06768 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17377 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20606 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16142 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25064 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30634 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06373 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022629 No alias not classified & original description: CDS=614-2965 0.03 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13838 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g049810.4.1 Solyc01g049810 Pentatricopeptide repeat-containing protein At5g56310... 0.01 OrthoFinder output from all 47 species
Solyc06g084580.1.1 Solyc06g084580 Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species
Solyc11g008970.1.1 Solyc11g008970 Pentatricopeptide repeat-containing protein At4g39952,... 0.02 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Spa_g04429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21770 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.01 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 570 599
IPR002885 Pentatricopeptide_repeat 174 201
IPR002885 Pentatricopeptide_repeat 276 299
IPR002885 Pentatricopeptide_repeat 202 232
IPR002885 Pentatricopeptide_repeat 101 131
IPR002885 Pentatricopeptide_repeat 376 401
IPR002885 Pentatricopeptide_repeat 503 549
IPR002885 Pentatricopeptide_repeat 301 347
IPR002885 Pentatricopeptide_repeat 402 449
No external refs found!